PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc029089.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB_related

Protein Properties

Length: 324aa MW: 37308.8 Da PI: 10.7658

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc029089.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52	1.7e-16	64	109	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+WT+ Ed+ l+++v+++G W+tIa++++ gR +kqc++r ky Cse_sc029089.1_g010.1 64 KGPWTKKEDKDLIRLVEKYGAQKWSTIAQHLP-GRIGKQCRERSSKY 109 79****************************.******996666 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MILQTRHFKP GICTTQSTSR MKNHANGTLL MAHKVSKESM LNVSRTEQTC LHRWQKVLNP 60 ELVKGPWTKK EDKDLIRLVE KYGAQKWSTI AQHLPGRIGK QCRERSSKYF VGFDIVCGYE 120 DEEKKLLLEC VERNVFGKPI NKESNALSTD PSEWAKVKLE NSIAKYLYKG NASGPAKIAV 180 KKVIKRAKKK KEQRAFAVPR RLSPPPATDE RRKSELISKV IMKKPSNLDF FMAHMVIHMK 240 LFLWMLGRLN IRFWTLVNHL VTITLTSPNH FVTLVSPEDD SDVCTMEAHR RKSKGKRVAP 300 NRKCAKRELP LSKGFVEKGY RIQI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	192	RAKKKKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	3e-29	MYB family protein