PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc029380.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 259aa    MW: 29568.7 Da    PI: 8.1172
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc029380.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1323.9e-10112187190
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 
                            ++Y++YAk++GF+vr  + k+ ++            k g  ++++++     r+ +++rt+Cka ++v+   ++ +  +++++ HnH+
  Cse_sc029380.1_g030.1 112 QYYKDYAKRAGFEVRLGQYKEGTNP---------APKAGALKKKSNS-----RKVSSKRTDCKAVFRVRHIPRKGYWCYDFVEGHNHS 185
                            69***************87666222.........3567776666555.....8999****************999999********** PP

                   FAR1  89 la 90 
                            l+
  Cse_sc029380.1_g030.1 186 LV 187
                            97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MKQDVLERES NARVDLLMSQ KLAEDLRVLQ MDTSKMDPMD ATICVMAIVD AHQFNQGHFI  60
VKSLINYEYE LVPHSVGIVS EVEGCKIWVP DIPVGQKPAY GMMYHSLEQA YQYYKDYAKR  120
AGFEVRLGQY KEGTNPAPKA GALKKKSNSR KVSSKRTDCK AVFRVRHIPR KGYWCYDFVE  180
GHNHSLVSEE DSVFLVSSRE VTHTQQFFLC QASQVNIGPV KGFNLLRQIY GDYDFIGASS  240
VDCKNYRRDV LDFIGKNDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.11e-07FAR1 family protein