PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc029392.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 284aa MW: 32219.9 Da PI: 7.7622

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc029392.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16	3.5e-05	77	98	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C++ Fs+ n++rH r+H Cse_sc029392.1_g010.1 77 KCDKCSREFSSTINYRRHKRVH 98 7*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MPVMKLLGTN TTDAMKVDDG CDSLGTFIRQ AVGKEPLFSF PRTGDSPVQW IQLLHDMDQQ 60 EFPGWPLLAP KKVQMQKCDK CSREFSSTIN YRRHKRVHRR SMNFHKDPQK YRDLLGAFWD 120 KLSYDAAKEV MSFEDVSLEK VTGSSIVWNV SANLRKAAYI FFPQVYVKAG SDLVDIIQGS 180 PSRLSITSQE LFSILDNASE RTFLCAGTAE SLQKYVFDGD AEKIGLQTEN LIACTSFLVE 240 RKLVKACLAY KDAEALRCQK LLFEEEEAAQ RRYAIAISIH FSTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	5e-99	C2H2 family protein