PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc029499.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 139aa    MW: 16000.3 Da    PI: 11.2947
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc029499.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.74.8e-171661147
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           +g+WT+ Ed +l+++v + G ++W+ I + ++ gR++k+c++rw + 
  Cse_sc029499.1_g020.1 16 KGSWTPHEDTKLIKLVSEQGARNWSVIGSSIP-GRSGKSCRLRWCNQ 61
                           799*****************************.***********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MTNDDVNLFK KTTFAKGSWT PHEDTKLIKL VSEQGARNWS VIGSSIPGRS GKSCRLRWCN  60
QLSPNVQHRP FTPHEDDSHP PRTRHPRILC LRKLELVWKK TSARTKITKT FARGANIPRY  120
KSTQSKHFGK EHHTTTKMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50060.16e-27MYB family protein