PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc029790.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LBD
Protein Properties Length: 155aa    MW: 17216.4 Da    PI: 8.4697
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc029790.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260135.12.7e-4212110199
                 DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88 
                            +CaaCk+lrrkC ++Cv++pyfp e+p kf nvhk+FGasnv+kll+++ +++reda++sl+yeAear++dPvyG+vg i+ lq+q+ 
  Cse_sc029790.1_g040.1  12 PCAACKFLRRKCIRGCVFSPYFPPEDPTKFINVHKIFGASNVSKLLNEIAPHQREDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVL 99 
                            7*************************************************************************************** PP

                 DUF260  89 qlkaelallke 99 
                            +l++el+++++
  Cse_sc029790.1_g040.1 100 RLQKELDATNA 110
                            ******99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MASSSHPSYS APCAACKFLR RKCIRGCVFS PYFPPEDPTK FINVHKIFGA SNVSKLLNEI  60
APHQREDAVN SLAYEAEARL KDPVYGCVGA ISVLQRQVLR LQKELDATNA DLIRFSSNQN  120
TLMTPQIPGS SLQNPNAFPT NYGTYSWDYN QGERG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27650.17e-67LBD family protein