PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc029826.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 341aa MW: 37600.1 Da PI: 7.4939

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc029826.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.2	5.2e-56	17	145	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lppGfrFhPtdeel+++yL +kv + ++++ ++i++vd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgk Cse_sc029826.1_g010.1 17 LPPGFRFHPTDEELITCYLLRKVLDGSFTC-RAIADVDLNKCEPWELPQKAKLGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGK 103 79*************************9.89***********99999******************************* PP NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129 d+e++s+ +++lvg+kktLvfy+grapkgek++Wvmheyrle Cse_sc029826.1_g010.1 104 DREIYSSkTSSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 145 *9867778**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MEFFSQQFGN NNGDSQLPPG FRFHPTDEEL ITCYLLRKVL DGSFTCRAIA DVDLNKCEPW 60 ELPQKAKLGE KEWYFFSLRD RKYPTGLRTN RATEAGYWKA TGKDREIYSS KTSSLVGMKK 120 TLVFYRGRAP KGEKSNWVMH EYRLEGKFAY HFLSKSSKDE WVISRVFQKS ISGGAVIGSG 180 TKRSAAGMTS YQEVSSASVS LPPLLDSPYA TATSAYTAEH DTFSYDSNAA SKEPHVPCFS 240 TASATNFDSH PTVFDLPPPP LSAANFGGAA VSVFPSLRAL QENLQLPFFY SSVAPPQPPI 300 HGDGGMCSYG NFSSGNWLPS VSSAAETQKP GPTELDCIWS F

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	181	188	TKRSAAGM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	1e-109	NAC family protein