PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc029830.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family G2-like
Protein Properties Length: 306aa    MW: 34532.7 Da    PI: 6.4438
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc029830.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.43.3e-332074155
                G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                           kprl+WtpeLH+rFv+av+qLGG+ekAtPk++++lm+++gLtl+h+kSHLQkYRl
  Cse_sc029830.1_g030.1 20 KPRLKWTPELHQRFVDAVAQLGGPEKATPKSLMRLMGIHGLTLYHLKSHLQKYRL 74
                           79****************************************************8 PP
2Myb_DNA-binding67.13.1e-212273148
                           TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                           r++WT+e+++++vdav+qlGg+   t+k+ +r mg  g+tl+++ks++qky+
  Cse_sc029830.1_g030.1 22 RLKWTPELHQRFVDAVAQLGGPekaTPKSLMRLMGiHGLTLYHLKSHLQKYR 73
                           89*************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MAHENIQKQD LNLVLSSDAK PRLKWTPELH QRFVDAVAQL GGPEKATPKS LMRLMGIHGL  60
TLYHLKSHLQ KYRLGKIQQS SVCSGSIQEE FVDDHRSEIT SMHQSEEIPN QINESKKIAQ  120
ALQMQMEVQR KLHEQIEVQR HLQLRIEAQG KYLQSVLRKA QDTLAGYNSS AIEVEVAKAE  180
LSQLVSMVDN GCPSSLSVLT ELEDSTLKKD SNESLKTKAV GSSLESSLTS SESSERKEND  240
HQVLSLMEMS TERKRSGSTI SDGNYQGKRL HKDSNNKFDL NSQYVNEVDF DFDFESKSNT  300
LDLNSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.16e-74G2-like family protein