PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc029860.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YB
Protein Properties Length: 218aa    MW: 24401.7 Da    PI: 6.5084
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc029860.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB1733.1e-5450144195
                  NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylk 88 
                            vreqdrf+Pianv+rim+k+lP +akis+daket+qecvse+isfvt+ea+d+cqre+rkti+++d+lwa+++lGf+dy+epl+vyl+
  Cse_sc029860.1_g030.1  50 VREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFVTGEANDRCQREQRKTITAEDVLWAMSKLGFDDYIEPLTVYLH 137
                            69************************************************************************************** PP

                  NF-YB  89 kyreleg 95 
                            +yrel+g
  Cse_sc029860.1_g030.1 138 RYRELDG 144
                            ****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MERGEGFHGY HRLPIHPTSG GTLQPDMKMK LPEMTNKNST IPTDDNECTV REQDRFMPIA  60
NVIRIMRKIL PPHAKISDDA KETIQECVSE YISFVTGEAN DRCQREQRKT ITAEDVLWAM  120
SKLGFDDYIE PLTVYLHRYR ELDGGERGSI RGEPLVKRTA DPGHFGMIPF VPAFHMGHHH  180
NGFFGPASIG GFMKDPSSAG PSVPAAVAGF EPYAQCKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.15e-74NF-YB family protein