PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc029989.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 243aa    MW: 27878.5 Da    PI: 8.4502
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc029989.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK48.61.5e-1590135752
                 RWP-RK   7 ledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                             e +++y+++pi++A  + +++ T+ K++CR++ I+R P+Rk++s+
  Cse_sc029989.1_g010.1  90 REIIAQYYYMPIAKATEKFNIGITIFKKRCRELCIQRCPYRKLRSI 135
                            6789***************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MSLKHRWHEA IWGDIEASDA EVEMIPDDDV NSTDDKKKKS QPNNHISIVS RLDIEDSDAE  60
IDMTPADVDQ GEASVPIVKK KADVKKKPRR EIIAQYYYMP IAKATEKFNI GITIFKKRCR  120
ELCIQRCPYR KLRSIQLLIN TIQAENGGAK VDGNTQQIIT RLQEEKKCVE DNPESEFGKS  180
TKRLRQFYFK SKYKRRKSMS LILSLTNQPT TSSAIELHYS SETSTAEHTN SKDGYAFDCS  240
KHD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66990.13e-30Nin-like family protein