PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc030048.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 232aa    MW: 26614.6 Da    PI: 9.6846
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc030048.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.35.9e-0929110790
                   FAR1   7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                            A++ GF ++k ++k+    g  ++ +f Cs++g++++e  + ++ +r++++ +++C  +l  k  k +  w +      HnHe++
  Cse_sc030048.1_g010.1  29 AQSNGFLIVKGRTKTD--RGYKYSIEFLCSRHGTSAREGLE-DELERQTSTAKINCPFRLLAKFIKgRTGWILRVKCPRHNHEFV 110
                            8899*******98888..6667****************999.8888899999*************988899999889*****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MYTNVVKNGF IKVVFRTEVA LTDWVQSTAQ SNGFLIVKGR TKTDRGYKYS IEFLCSRHGT  60
SAREGLEDEL ERQTSTAKIN CPFRLLAKFI KGRTGWILRV KCPRHNHEFV DSFHDFSQAM  120
RLKESELVLV KQLTKKQVAP RIILSSLKES DPNNVSSIKT VYNAQDKICR ANRGDLTPIQ  180
LLLVHLRRQG YTYYPRTLEA SLELARNPID HACQSSGILY ELIDDINNLH VE