PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc030052.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 165aa    MW: 18970.4 Da    PI: 8.1415
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc030052.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.92e-171762148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           rg++T+eE++++++++  +G++ W++Ia+ ++ gR+++++k++w+++l
  Cse_sc030052.1_g020.1 17 RGNFTKEEEDIIIKLHLDMGNK-WSAIAALLP-GRSDNEIKNHWHTHL 62
                           89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MGLVMCTANM IRKSVKRGNF TKEEEDIIIK LHLDMGNKWS AIAALLPGRS DNEIKNHWHT  60
HLKKRSTKQN HHVVHEVKDE QKLNVSRIIN FSVLPPSIVS TSSDNRVSNE YTASHIISHE  120
SAASQRNSDD STSRPCVQHR LLIDLNQEYV ESWEEDNKLK KEFVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.26e-26MYB_related family protein