PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc030107.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 145aa    MW: 17026.1 Da    PI: 6.2895
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc030107.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM100.52.3e-3148051128
                    NAM  51 vkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                            +k+++ ewyfFs  dkky +g+r+nrat++gyWk+tgkd++v+  ++el+g+kktLv+++grapkge+t+Wvmhey+l
  Cse_sc030107.1_g030.1   4 LKTRDLEWYFFSVLDKKYGNGSRTNRATEKGYWKTTGKDRTVYF-RSELTGMKKTLVYHSGRAPKGERTNWVMHEYKL 80 
                            456778**************************************.999****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
LSRLKTRDLE WYFFSVLDKK YGNGSRTNRA TEKGYWKTTG KDRTVYFRSE LTGMKKTLVY  60
HSGRAPKGER TNWVMHEYKL IDKELESAGV VQVRIFHKSG SGPKNGEKYG APLIEEEWEE  120
EEPIFVPKQE DFTEELPFDM DSYLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.19e-60NAC family protein