PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc030247.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 569aa MW: 63125.9 Da PI: 7.0807

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc030247.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	22.1	4.9e-07	504	547	2	47
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 Y YA ++ F v+ks ++k+ ng++t+r +vC ++gk+++ ++ Cse_sc030247.1_g010.1 504 AYTVYAAKARFGVCKSGTRKK--NGKVTHRYLVCHRHGKPRKPVET 547 599***********98887..999***********9987766 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MTKPINYLGE TPLMIAVGTN TSHSFVKQLV DRIISIGEAD KLFLTSSSGD NPLHRAAKIG 60 NTIDARILVE QNRDMAQAPD ANGYTPLTLA ACHRNKSILR YLLKFTRELL SEEEGSSLYT 120 GVAGGDLITL TIQAGFLAPS IKDLHDIKVN DYLSKLLTKC ICTRVLEKVD HDLTWKILGS 180 ATSAAVQYGT PEVIEECIKT YPDIIWYTGK GFHLSLEAIT QRQEQVYNVI WRSSIHNLSQ 240 ANLIDLEEME NSLHKAAKLA PPHRLNIVTG AALQLQRELQ WSKEVENLVE PSYKQALNKN 300 KKTPKVTFIE EHKDLLDEAQ QWMKDTASSC TVVAALIITM AFAGAFTLPG GNEEDGKPLF 360 LNKGTFMLFI VSDAIALFSS TASVLMFLGI LTARFAHDDF LYNLLKRMTI GLVSFFVSLA 420 ATMIAFSATL VLVLVLEHKV SWIAAPLVVI TCIPVDANEI DVYDIDPECI PTSNGHKYWV 480 PNIPDNEKPR KGDIFATFDE ALKAYTVYAA KARFGVCKSG TRKKNGKVTH RYLVCHRHGK 540 PRKPVETNTL IEDPNPVVEE VVISPLRGT

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MTKPINYLGE TPLMIAVGTN TSHSFVKQLV DRIISIGEAD KLFLTSSSGD NPLHRAAKIG  60
NTIDARILVE QNRDMAQAPD ANGYTPLTLA ACHRNKSILR YLLKFTRELL SEEEGSSLYT  120
GVAGGDLITL TIQAGFLAPS IKDLHDIKVN DYLSKLLTKC ICTRVLEKVD HDLTWKILGS  180
ATSAAVQYGT PEVIEECIKT YPDIIWYTGK GFHLSLEAIT QRQEQVYNVI WRSSIHNLSQ  240
ANLIDLEEME NSLHKAAKLA PPHRLNIVTG AALQLQRELQ WSKEVENLVE PSYKQALNKN  300
KKTPKVTFIE EHKDLLDEAQ QWMKDTASSC TVVAALIITM AFAGAFTLPG GNEEDGKPLF  360
LNKGTFMLFI VSDAIALFSS TASVLMFLGI LTARFAHDDF LYNLLKRMTI GLVSFFVSLA  420
ATMIAFSATL VLVLVLEHKV SWIAAPLVVI TCIPVDANEI DVYDIDPECI PTSNGHKYWV  480
PNIPDNEKPR KGDIFATFDE ALKAYTVYAA KARFGVCKSG TRKKNGKVTH RYLVCHRHGK  540
PRKPVETNTL IEDPNPVVEE VVISPLRGT