PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc030561.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Trihelix

Protein Properties

Length: 210aa MW: 24521.7 Da PI: 5.2047

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc030561.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	37.7	5.3e-12	32	130	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.........rergferspkqCkekwenlnkrykkikege.....kkrtses 75 Wt++e+ aLi+a+ e+ +l r+ l Weev+ k+ + r ++++ qC +k+++l++ry+ + +++ kk++++ Cse_sc030561.1_g030.1 32 WTDDETSALIDAYYEKRLSLMRTTLCDSEWEEVALKVaarchyvlsSTRNMQKTYAQCCHKMDKLRQRYRLEVQRAditkaKKERCPW 119 **********************************************************************887765111112334566 PP trihelix 76 sstcpyfdqle 86 +++++f+++e Cse_sc030561.1_g030.1 120 AQSWVHFKKME 130 66777777775 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MKEENETNIT NSPPQTIKKL ATSHSRGSLS WWTDDETSAL IDAYYEKRLS LMRTTLCDSE 60 WEEVALKVAA RCHYVLSSTR NMQKTYAQCC HKMDKLRQRY RLEVQRADIT KAKKERCPWA 120 QSWVHFKKME CLENGYFLSM GQFLDIPKNG SGLLEDEFVS NEEMNMEMVR EVGSSQSTHL 180 ELEMEETEWN TESQQSLVDW ILGADLQSKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	2e-23	Trihelix family protein