PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc030786.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 430aa MW: 48406.3 Da PI: 6.9771

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc030786.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.9	3.4e-52	24	151	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 + pGfrFhPtdeelv +yLk+k+++++l++ e ik++diyk++PwdLpk + ++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+ Cse_sc030786.1_g010.1 24 MLPGFRFHPTDEELVGFYLKRKIQQRPLSI-ELIKQLDIYKHDPWDLPKLAMTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGT 110 579*************************.89***********8777899***************************** PP NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 d++++++ +++ +glkk+Lvfykgra kg ktdW+mhe+rl Cse_sc030786.1_g010.1 111 DRPIYASeGSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRL 151 *9956677*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
DLELKRVLLM EERNENGEKI EEIMLPGFRF HPTDEELVGF YLKRKIQQRP LSIELIKQLD 60 IYKHDPWDLP KLAMTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYASEGS 120 KCIGLKKSLV FYKGRAAKGI KTDWMMHEFR LPSLTDHTVP SKRFLEKTIP ANDSWAICRI 180 FKKASSTAQR TLSHSWVSPI LPQTPSSDHN ILTQHGISSN DLQHSSITNN LSANMDHTAS 240 NSMSLYKSFN IDPTTPTLTN INNKPPQNSI SSSEDLNYST SYPFSFQEPN YSSKSSTVDT 300 SSLLVNMPTS IFGDFDKQGG LDYLTNGLNH DHQQCYNGCC FSITNIPVEM QENCVNGVQD 360 HEGQAGVTTI KGPAEGINSH LEDQWGRSSS GGYPFMSLPL GLQDAWKSSF LCDSSSEIST 420 GFSTTNKCYI

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

DLELKRVLLM EERNENGEKI EEIMLPGFRF HPTDEELVGF YLKRKIQQRP LSIELIKQLD  60
IYKHDPWDLP KLAMTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYASEGS  120
KCIGLKKSLV FYKGRAAKGI KTDWMMHEFR LPSLTDHTVP SKRFLEKTIP ANDSWAICRI  180
FKKASSTAQR TLSHSWVSPI LPQTPSSDHN ILTQHGISSN DLQHSSITNN LSANMDHTAS  240
NSMSLYKSFN IDPTTPTLTN INNKPPQNSI SSSEDLNYST SYPFSFQEPN YSSKSSTVDT  300
SSLLVNMPTS IFGDFDKQGG LDYLTNGLNH DHQQCYNGCC FSITNIPVEM QENCVNGVQD  360
HEGQAGVTTI KGPAEGINSH LEDQWGRSSS GGYPFMSLPL GLQDAWKSSF LCDSSSEIST  420
GFSTTNKCYI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-104	NAC family protein