PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc030886.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 108aa    MW: 12525.5 Da    PI: 10.278
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc030886.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.38.7e-191562148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT+eEd +++ +v+ +G g+W++++++ g++R++k+c++rw +yl
  Cse_sc030886.1_g030.1 15 KGPWTAEEDAKILAYVASHGIGNWTLVPQKAGLNRCGKSCRLRWTNYL 62
                           79********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    
MGRRPPCCDK LHVKKGPWTA EEDAKILAYV ASHGIGNWTL VPQKAGLNRC GKSCRLRWTN  60
YLRPDLKHDS FTPDEEDLIL RYHQAIGRTD KDVKNHWNTK LKKKLSKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28470.17e-54MYB family protein