PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc031122.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 147aa    MW: 16648.1 Da    PI: 8.6969
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc031122.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.16.4e-081558753
                           HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
                    HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53
                           ++E++RRd++++ +++L +ll  +   + ++ s    LekA++ Ik+
  Cse_sc031122.1_g010.1 15 AMEKQRRDQMKHLYSKLASLLRLQ---SYERISLLGLLEKATDSIKQ 58
                           79*********************9...99****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MKRPSGSSSL QPPAAMEKQR RDQMKHLYSK LASLLRLQSY ERISLLGLLE KATDSIKQWK  60
ETVDRLTARK KELENELTGA MSKESNLHVV QVSEMDSNLE VNLIIQASNK KIELCQVLSI  120
IEQGGAEIIN YSFSCMGQNT HYTIHAQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10585.15e-15bHLH family protein