PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc031224.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB_related

Protein Properties

Length: 322aa MW: 37273.9 Da PI: 6.2528

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc031224.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.2	5.1e-10	106	175	1	48
TSSS-HHHHHHHHHHHHHTTTT......................-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg......................tWktIartmgkgRtlkqcksrwqkyl 48 +g W +eEde+lv++++ G + + ++ +++ g+ R++k+c++rw++yl Cse_sc031224.1_g010.1 106 KGLWAPEEDEKLVNYITTCGRHgcwssapkfaglslslspseykNRSRFSSRAGLQRCGKSCRLRWNNYL 175 678***************99************9999999999999999*************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MSYTSESSYS GESDIEELAD LEMFIQEFEG EQTLQEQEAG PSNHRRYGPR EREVVEARLW 60 WAQNEEVEVC YEGGGFVVIW HRSFLLQTRE RCEGENRLST RQKLKKGLWA PEEDEKLVNY 120 ITTCGRHGCW SSAPKFAGLS LSLSPSEYKN RSRFSSRAGL QRCGKSCRLR WNNYLQPGLK 180 RGSFSLQEAT LIMDLHDTFG NNHDFLLEQG YKDAAKVADG HESSYLPGRT DRAVKNFWNY 240 NTKKKLLQFQ LQTVNEQGRR VDAPLPLVKH DQETENEVDL HPLPPSFMKE YFDPKVDLHP 300 LPPSFMKECF DPNSIKIVIR II

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.1	2e-41	MYB family protein