PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc031295.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 332aa    MW: 37309.6 Da    PI: 9.4606
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc031295.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.71.3e-132370148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g W+++Ed++l+ +v  +G  +W++++   g+ R +k+c++rw +yl
  Cse_sc031295.1_g010.1 23 KGLWSPDEDQKLKYYVMNYGHSCWSSVPINAGLQRNGKSCRLRWINYL 70
                           678*******************************************97 PP
2Myb_DNA-binding30.77.2e-1076119148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            rg ++ eEde +  +++    +  k Ia++++ gRt++++k++w+++l
  Cse_sc031295.1_g010.1  76 RGEFSLEEDETISSLHRSIA-R--KQIAQHLP-GRTDNEIKNYWNSHL 119
                            899****************8.4..7*******.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
VTQRFTCKMR CKASEKPCPK HKKGLWSPDE DQKLKYYVMN YGHSCWSSVP INAGLQRNGK  60
SCRLRWINYL RPGLKRGEFS LEEDETISSL HRSIARKQIA QHLPGRTDNE IKNYWNSHLK  120
KRIEKLQHLQ TNPKTDYIST NMRSTEPSSS CPNSANFVNS SSSDMNQLVP PASQITTLPK  180
ILFADWISLD EFQKDLGKSS DQPFSHGSNY VVSHMHDYHE VSTQENKDSQ NCLINGSNNG  240
DMTKTKPKSQ GPKASRAQPK RQRKPQTDMP PTGDQTTSTR LLSEGQLNDP KDSEGTKQPA  300
DRDLTAIASR DSTGKNPSVL EGSTGDKDSE GL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25560.17e-55MYB family protein