PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc031677.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family SRS
Protein Properties Length: 325aa    MW: 35632.7 Da    PI: 7.8562
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc031677.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702209.86.8e-65852602153
                 DUF702   2 rsgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa............aeaaskrkre 77 
                            +sg+++CqdCGnqakkdC h+RCRtCCksrgf+C+thvkstWvpaakrrerqqql + ++++   +            +++++kr re
  Cse_sc031677.1_g020.1  85 NSGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQQQLMSVTQHHPLGTqqlslmmratgnDDQNPKRLRE 172
                            5799**************************************************9999887765444678887764332333333333 PP

                 DUF702  78 lkskkqsalsstklssa.eskkeletss...................lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkG 145
                               + + ++ ++   s+    +                         +P+ev+s+avfrcvrvs++dd+ee+laYqta s+gGhvfkG
  Cse_sc031677.1_g020.1 173 ---DPHRSMVASGSGSGgGGGM-----GmilpssqhhntcsgmgvglFPAEVNSPAVFRCVRVSAMDDAEEQLAYQTALSVGGHVFKG 252
                            ...3333333322222201111.....02222344666777778888***************************************** PP

                 DUF702 146 iLydqGle 153
                            iLyd+G+e
  Cse_sc031677.1_g020.1 253 ILYDHGPE 260
                            ******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MSRYFPLEAG IEISKVDKHH HHQIQIQDHD HNHDGIVSPY SLYLFKNEEI YNKSFELWQQ  60
YYQQQQHDAS SDSKVMRQGV YGSGNSGGMN CQDCGNQAKK DCPHMRCRTC CKSRGFHCQT  120
HVKSTWVPAA KRRERQQQLM SVTQHHPLGT QQLSLMMRAT GNDDQNPKRL REDPHRSMVA  180
SGSGSGGGGG MGMILPSSQH HNTCSGMGVG LFPAEVNSPA VFRCVRVSAM DDAEEQLAYQ  240
TALSVGGHVF KGILYDHGPE GSSSGSGAHG HHQQLNLITS STTAAATAST SVNPVVTNFI  300
DPSSAYPTPF SAFMAGTQFF PPPRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75520.12e-66SRS family protein