PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc031969.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 209aa    MW: 22999 Da    PI: 9.99
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc031969.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2163.4e-056688123
                           EEETTTTEEESSHHHHHHHHHHT CS
                zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                           ++C++C + F+++  L  H++ H
  Cse_sc031969.1_g020.1 66 FPCNYCQRKFNSSQALGGHQNAH 88
                           89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MKSRSPGQCN LQYGRKSSNH DHQQIRGDDP KLDLRLSLYD HDDHLTNVMA GIKSSEDHIQ  60
TSPRVFPCNY CQRKFNSSQA LGGHQNAHKK ERIIAKHKNR VSHGCMINTC FNTISPFGVQ  120
VHSMIVGKPQ NGSVFLLGSS TRNSIGARPA IGRFIQPSTS QKMNISGGLT YCIPGDMNGG  180
VTWGSGGDSS SYLKSKDDQL QKLDLSLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24625.12e-17C2H2 family protein