PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc032002.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 210aa    MW: 23122.7 Da    PI: 4.5553
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc032002.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22e-1857107155
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            + y+GVr+++ +g+W +e+r+p++   + r++lg+f tae+Aa+a++ a+++l+g
  Cse_sc032002.1_g030.1  57 PVYRGVRQRS-SGKWICEVREPYK---QSRIWLGTFPTAEMAARAHDVAALALRG 107
                            68*****999.7*********865...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MDMNNNYYDP FAYGSNNWGS SEMDIGESSG TSEEMMLAAS NPKKRAGRKK FQETRHPVYR  60
GVRQRSSGKW ICEVREPYKQ SRIWLGTFPT AEMAARAHDV AALALRGRSA CLNFADSWNL  120
PSPASLDPKD IRKAAVEAAE SFRPSEDGGG SSIVGTVEYG GNVGYVDEEE EFGMPGLLMN  180
MAEGLMLPPP PSYGGYDEVE YGGDMSLWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.12e-57ERF family protein