PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc032010.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 132aa MW: 14865.4 Da PI: 7.7441

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc032010.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.7	0.00039	33	55	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ + H++ H Cse_sc032010.1_g010.1 33 FSCSYCRRKFYSPQAFGGHQNAH 55 89**************9999988 PP

Sequence ? help Back to Top
Protein Sequence Length: 132 aa Download sequence
MSFLNLHQPE NNLTIASSSS LLSSLHITDQ RVFSCSYCRR KFYSPQAFGG HQNAHKLERT 60 LAKKSRELSS AARHNSEWNN MSSRSDSNGS THVEPLQLPV VAGVQHEQQL DSTRKGESVE 120 DEFSHLDLSL RL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57520.1	2e-21	C2H2 family protein