PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc032288.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 187aa    MW: 21355.8 Da    PI: 7.0134
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc032288.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY84.59.8e-27107165159
                            ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                            ldDgy+WrKYG+K++k ++ +r+Y++C++ gC+vkk+ver+++d ++++ tY g Hnh+
  Cse_sc032288.1_g030.1 107 LDDGYRWRKYGKKKIKCTPSARNYFKCSTMGCKVKKRVERDSDDSSYIIATYIGLHNHD 165
                            59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MFYCILYIIN STDNSNPNTH SLMDHQDSSS SNSLSYLNTN EQTPDHLLEI NTDVNISKSP  60
QISDDAASMT QLTWIERQLL YDDNSNRERM NDGTKIGFRI RTALEVLDDG YRWRKYGKKK  120
IKCTPSARNY FKCSTMGCKV KKRVERDSDD SSYIIATYIG LHNHDVPSTT ASISNTCPTG  180
VWTLQYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.16e-31WRKY family protein