PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc032483.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 303aa    MW: 33113 Da    PI: 5.329
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc032483.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.00027277300123
                            EEETTTTEEESSHHHHHHHHHH.T CS
                zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                            ++C+ C++ F++   L++H +  H
  Cse_sc032483.1_g020.1 277 HSCKSCNRNFKTDGALQSHNQAkH 300
                            79*****************76555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MEFWGVEVKS GEAFEVNLDD AKVLHLSQAC LGETKNNKGE SSVVLHINVE GKKLVLGTLH  60
SERLPQQLFD LVFDKTFTIS HNWKNGSVYF YGYQADQPSD DDSYPLCPHS EEEEEAIRLP  120
VPNGKREAKK EVKETKKEEK SVASNKKDAK QVTIVEPGKD DSDDSDSDDS DDSDSKSTDS  180
GSDEEGSGKD SSDDSDDSSN EEEETPKKPE SGKKRQNESA LKTPTTDKKA KMTTPQKTDG  240
KKAAVHVATP HPSKKPDAKT GNKSNQKSPA SAADGAHSCK SCNRNFKTDG ALQSHNQAKH  300
TSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.27e-32C2H2 family protein