PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc032960.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 215aa    MW: 24897.4 Da    PI: 8.2386
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc032960.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.32.1e-06106152454
                            HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                            +h+++Er  R++i+ +++ L+ l+  +    +k  +Ka+iL + + Y++ L
  Cse_sc032960.1_g010.1 106 SHSIAERATREKIKRKMQFLQYLVKGC----NKVTNKAAILDEIITYVQCL 152
                            8*************************9....677*************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MDEILKIFDH SPPSHYQMHH HDHFQHGQEN VGSQLNGVSE SEFPLSSIFN FGCSELVEVE  60
VDSQKQSIEC DSELVEPPKA KRNTQIQSQK WDYIHVRARR GQATDSHSIA ERATREKIKR  120
KMQFLQYLVK GCNKVTNKAA ILDEIITYVQ CLKMEVERPW GHNIAMHNPL DSFEQLHSLR  180
CKEAKCIKCK RYKRVLVRHA FSCLVTLHEA AFKAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18300.12e-31bHLH family protein