PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc033199.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family CAMTA
Protein Properties Length: 150aa    MW: 17440.9 Da    PI: 5.1068
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc033199.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-152.31.1e-162541769
                   CG-1 17 iLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEd 69
                           iL+++ek+el +++++rp  gs++Ly+r     fr+DGyswkkk + ktv+ d
  Cse_sc033199.1_g020.1  2 ILTSYEKFELRNSSPDRPVAGSVFLYDRVSCNSFRNDGYSWKKKSNEKTVHWD 54
                           899**********************************************9866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MILTSYEKFE LRNSSPDRPV AGSVFLYDRV SCNSFRNDGY SWKKKSNEKT VHWDYVDIVF  60
VHYREITQGC EKPEIETLTF KTEIKGDDEI ALLVRLSKVL LSSVGVESKW IGSSVDNWEK  120
FLLKDEVEFC SLRTEIECSW LKIIKGEGKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09410.36e-12CAMTA family protein