PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc033252.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 498aa MW: 56038.4 Da PI: 5.703

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc033252.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.6	6e-50	212	345	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyW 83 lppGfrFhPtdeel+v+yL +k ++ + + ++i++vd+yk+ePwdLp+++ ++kewyfF++rd+ky++g+r+nr+t++gyW Cse_sc033252.1_g010.1 212 LPPGFRFHPTDEELIVHYLSHKSRSMEpfasvASPPSIIADVDLYKHEPWDLPEMALFGTKEWYFFTPRDRKYPNGSRPNRVTRNGYW 299 79*******************999977654222348***********77667999*********************** PP NAM 84 katgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127 katg dk+++sk + +vg+kk Lvfy g+ kg kt+W+mheyr Cse_sc033252.1_g010.1 300 KATGADKPIKSKsdPKVTVGIKKALVFYAGKGTKGIKTNWIMHEYR 345 *******9666677*************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MVVVGGLAVG DGQGIDRAYS VALCRGDINS DVCQRCLRDT IANVRKAYAC PNSIYASAIY 60 EYCTLIFNND TLLGNPETRE YQYINVQGKN STNVDLFYGA LRPFMEKLRA EASNGGPLRK 120 FATGKTTVPD FTSIYGLMQC TPDLSKQNCS ACLEDIIRRI PSFIGAKDAG RILAAKCFLR 180 YDSRLFFNEC RSLVTSPPSS PRVKDAEVEL NLPPGFRFHP TDEELIVHYL SHKSRSMEPF 240 ASVASPPSII ADVDLYKHEP WDLPEMALFG TKEWYFFTPR DRKYPNGSRP NRVTRNGYWK 300 ATGADKPIKS KSDPKVTVGI KKALVFYAGK GTKGIKTNWI MHEYRHPAPS KLDDWVLCRL 360 YNKKNNPKEM IMPPQDNTTS PLDELQSEQS YSAISGSLDS FEYSEGDFGG KIDNDNYMFL 420 GDLEPEHSTV TKDTSDQRDM GLIDSLMQKE LDDGNNWLDG LSLEDLHHCL EAMPTSYDIY 480 GMPMTGKWDS LGIDQFFL

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MVVVGGLAVG DGQGIDRAYS VALCRGDINS DVCQRCLRDT IANVRKAYAC PNSIYASAIY  60
EYCTLIFNND TLLGNPETRE YQYINVQGKN STNVDLFYGA LRPFMEKLRA EASNGGPLRK  120
FATGKTTVPD FTSIYGLMQC TPDLSKQNCS ACLEDIIRRI PSFIGAKDAG RILAAKCFLR  180
YDSRLFFNEC RSLVTSPPSS PRVKDAEVEL NLPPGFRFHP TDEELIVHYL SHKSRSMEPF  240
ASVASPPSII ADVDLYKHEP WDLPEMALFG TKEWYFFTPR DRKYPNGSRP NRVTRNGYWK  300
ATGADKPIKS KSDPKVTVGI KKALVFYAGK GTKGIKTNWI MHEYRHPAPS KLDDWVLCRL  360
YNKKNNPKEM IMPPQDNTTS PLDELQSEQS YSAISGSLDS FEYSEGDFGG KIDNDNYMFL  420
GDLEPEHSTV TKDTSDQRDM GLIDSLMQKE LDDGNNWLDG LSLEDLHHCL EAMPTSYDIY  480
GMPMTGKWDS LGIDQFFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	1e-67	NAC family protein