PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc033273.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 361aa    MW: 41404.2 Da    PI: 4.768
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc033273.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK825.8e-26186233552
                 RWP-RK   5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                            +s e++++yF++pi++AAkeL+v+lT+LK++CR++GI+RWPhRk+ s+
  Cse_sc033273.1_g020.1 186 LSREVIAQYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSI 233
                            7899*****************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MESQNALEIE CWSNHEIIPN EDEFYSFQHQ LPPLDLSPYD LMHVQQDHYL HNHATYNMMD  60
FASPNPMFSP MDVLPGLHDQ KMSTTNALSF PNQEMYTMNE LGFPNEEMYE MNSFDGFPNQ  120
EMYATNSLGF SYQTQPAIIN VNDNNKEMNM VNLGCCEQKK EDKKKGDNEN GNDSGRSFNY  180
ESRMVLSREV IAQYFYMPIT QAAKELNVGL TLLKKRCREL GIRRWPHRKL MSIQTLINNV  240
QEGKTSANGA EGKIQEVIGR LEEEKRKLEE IPDLQLKDNT KRLRQACFKA NYKKRKTMGS  300
APSVTNSSTS NVTTQLSSSC SSNHAGYEVM EDDYGGDYDE QEEIKSILYT NCLPSSNDGL  360
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.13e-42Nin-like family protein