PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc033323.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 181aa    MW: 21041.8 Da    PI: 9.6419
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc033323.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding63.25.1e-201562148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           rg+WT+eEde+l++a++ +G++ W+ Ia + g+ R++k+c++rw++yl
  Cse_sc033323.1_g020.1 15 RGAWTAEEDEKLAEAIEIHGPKKWTVIATKAGLQRCGKSCRLRWLNYL 62
                           89********************************************97 PP
2Myb_DNA-binding51.72e-1668113148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l
  Cse_sc033323.1_g020.1  68 RGNISDQEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 113
                            78999*****************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MDSTSKKSKN KEINRGAWTA EEDEKLAEAI EIHGPKKWTV IATKAGLQRC GKSCRLRWLN  60
YLRPNIKRGN ISDQEEDLII RLHKLLGNRW SLIAGRLPGR TDNEIKNYWN SHLSKKKETM  120
EKQTDHKKKM KEEDVTDRDK HGVESSKFSF NVDEFFDFSN EDPSTLDWVN RYLAGTSGVF  180
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14750.18e-55MYB family protein