PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc033342.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HSF
Protein Properties Length: 517aa    MW: 59245.2 Da    PI: 5.29
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc033342.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind87.51.8e-27772022101
                            HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT............... CS
           HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks............... 74 
                            Fl+k+++++ d+el+++isws++g sf+v+d+  f++ vLp+ Fkh+nf+SFvRQLn+Y    +  + ++  +               
  Cse_sc033342.1_g010.1  77 FLSKTFDLVTDPELDQIISWSKTGASFIVWDPVAFSRMVLPRNFKHNNFSSFVRQLNTYVRIYLPFTLETLYHkghfvrlyvdhqlll 164
                            9**********************************************************63333322222222456779999999999 PP

                            ...........XTTSEEEEESXXXXXXXXXXXXXXXXX CS
           HSF_DNA-bind  75 ...........kekiweFkhksFkkgkkellekikrkk 101
                                       +++ weF+ ++F  gkk+ll++ik+++
  Cse_sc033342.1_g010.1 165 lpmfflgfrkiHTDRWEFAAENFLLGKKHLLKNIKKRR 202
                            9988888775559**********************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 517 aa     Download sequence    
MGPFEYLVSI FILCESMEPY YNRSLSDSLF RSSSSNLRHQ PVPLSMACED DTAVELGPDE  60
DVPRPLDCLH GTLVPPFLSK TFDLVTDPEL DQIISWSKTG ASFIVWDPVA FSRMVLPRNF  120
KHNNFSSFVR QLNTYVRIYL PFTLETLYHK GHFVRLYVDH QLLLLPMFFL GFRKIHTDRW  180
EFAAENFLLG KKHLLKNIKK RRPTGSNATA NEVGTTLSIE AEVEQLQKER IEMKQEVMTL  240
KQQQRGTNQY LESVNEMLQA AEDRQKQMVT SLAKVFQSPR FKKGKGLISS PRNTRKFLKH  300
DPIPVDDTVR NSDHVPFHDD LQELAQTEDP VVKEEKIFGI NRQKQMVTSL AKVFQSPRFK  360
KGKGLISSPR NTRKFLKHDP IPVDDTVRNF DHVPFHDDLQ ELAQTEDPVV KEESVFDLDF  420
EATPEYLISS PMNLVKQEDI WPSDFQTVGE IPSTSNEMWN DVRNYELPEL GVEGGELSDF  480
WNLEAASGAE NILSGETVKP TNMDFDSLVG LVNSSLV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1191201KKHLLKNIKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03720.15e-71HSF family protein