PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc033538.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 260aa    MW: 28920.4 Da    PI: 4.4656
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc033538.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.32.1e-1960110155
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                            + ++GVr++  +g+WvAeIr+p   + r kr +lg+f +a eAa+a+++a+++++g
  Cse_sc033538.1_g020.1  60 CSFRGVRQRT-WGKWVAEIREP---N-RgKRLWLGTFASAVEAARAYDEAARAMYG 110
                            579****999.**********8...3.35************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MDNLTKKQKR KRTEGPKIVA ETLTKWIKIN EDAKTTRKAP AKGSTKGCMK GKGGPENSRC  60
SFRGVRQRTW GKWVAEIREP NRGKRLWLGT FASAVEAARA YDEAARAMYG PSARINLPNY  120
CPDASLLCKT ASSYTQNVCQ ASASEVDVTG ICNDDGYYQG FPEDEMIDID ELLGLMDDQK  180
DESINEAESS GHPMYDAWFE NKLDDFGFDF METGPEECNF TLEEFGLSLD PAEPVMTGPE  240
ECGFTLKEFG LSLDPAEPVM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.12e-36ERF family protein