PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc033590.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 293aa    MW: 32978.9 Da    PI: 9.447
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc033590.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding231.8e-072568445
                           S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
        Myb_DNA-binding  4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                           WT+ E +l+ +a +++ ++   +W ++a++++ g+t  ++   + 
  Cse_sc033590.1_g020.1 25 WTPFENKLFENALAKFDKDtpeRWQKVAEMVP-GKTVADVMRQYK 68
                           ********************************.****99988775 PP
2Myb_DNA-binding46.58.7e-15138182347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            +WT+eE++l++ + k++G+g+W+ I+r    +Rt+ q+ s+ qky
  Cse_sc033590.1_g020.1 138 PWTEEEHKLFLLGLKKYGKGDWRNISRNYVVTRTPTQVASHAQKY 182
                            8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MKWESENMSN SSSYVMGESL KSTIWTPFEN KLFENALAKF DKDTPERWQK VAEMVPGKTV  60
ADVMRQYKEL EDDVSSIEAG FYPKYGYNNN STNCGFTLEY GNNYGFDRCK SPPYCAGGRP  120
SPVAAGRPVE QERKKGVPWT EEEHKLFLLG LKKYGKGDWR NISRNYVVTR TPTQVASHAQ  180
KYFIRQLSGG KDKRRASIHD ITTVNVNESQ NPLPKNKRAS PEQCKFQWNQ PNGGGTGGAA  240
VAFNQTNGNI FMSPQYRDNA GFKMGGGGGL HEFYSTPQSM VFQMQPAMHY PQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.16e-74MYB_related family protein