PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc033668.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family SBP
Protein Properties Length: 179aa    MW: 19949.5 Da    PI: 8.846
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc033668.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP113.89.5e-3643119278
                            -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
                    SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                            Cqv+ C  dl  ak+yh++h+vCe h+kap vlv gl +rfCq+Csrfhe+sefD++krsCrr La+hne rr+kq+
  Cse_sc033668.1_g010.1  43 CQVDCCGDDLRVAKQYHQKHRVCELHTKAPLVLVGGLPRRFCQKCSRFHEVSEFDDAKRSCRRGLARHNEVRRQKQH 119
                            **********************************************************************9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MDSQMLPSKN HENNVGVKNK NMLGFGSGSR NNETVDMKGV FGCQVDCCGD DLRVAKQYHQ  60
KHRVCELHTK APLVLVGGLP RRFCQKCSRF HEVSEFDDAK RSCRRGLARH NEVRRQKQHE  120
ETKESLLCEG SKSKQHGSSP GQSIHVGERS RSLVDLQGNG GFTDLLINCL LSSITQSPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.13e-31SBP family protein