PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc033935.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 506aa MW: 56946.3 Da PI: 7.4835

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc033935.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29.6	2.2e-09	451	499	1	47
FAR1 1 kfYneYAkevGFsvrkskskkskrngeit..krtfvCskegkreeekkk 47 ++Y++YAk++GF+vr +++ sk+n+e + + fvCskeg++ k Cse_sc033935.1_g020.1 451 QYYKDYAKRAGFEVRLGQQYISKKNKENIldLKYFVCSKEGTNPAPKAG 499 69****************997776544125789****99876655 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MASSQQSIYT SIVLFLLCIQ LLSFNSEAVV PASDTFTYVN EGDFGDYIVE YDANYRALSP 60 FNNPFQLCFY NTTPNAFTLA LRMGTVRSES LMRWVWEANR GKPVRENATF SLRTNGNLVL 120 ADADGSVVWQ TNTANKGVVG FQVLPNGNMV LHDGKGNFIW QSFDSPTDTI LVGQSLRAGG 180 ANKLVSRASE VNNVVGAYSL VMEPKGLSMY YKSPNSPRPI LYWTSSEWFT INKGTLTNLT 240 LTSVSDTDEG FLYYLTFIYF VTNSSSDSNR NMAYSRYNNT LSYLRLGIDG NLRFYTYNPN 300 VQGVAWELVY TFLDRDSMEK ECQLPERCGK FGLCEDSQCV ACPTPNGLTG WSKDCDVKKV 360 TSCKATDFKY YKLEGVDHFM IKYTRGDGAT KQSDCESKCT RDCKYNEYEP VPHSVGIVSE 420 VEGCKIWVPD IPVGQKPAYG MMYHSLEQAY QYYKDYAKRA GFEVRLGQQY ISKKNKENIL 480 DLKYFVCSKE GTNPAPKAGA LKKKSN

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MASSQQSIYT SIVLFLLCIQ LLSFNSEAVV PASDTFTYVN EGDFGDYIVE YDANYRALSP  60
FNNPFQLCFY NTTPNAFTLA LRMGTVRSES LMRWVWEANR GKPVRENATF SLRTNGNLVL  120
ADADGSVVWQ TNTANKGVVG FQVLPNGNMV LHDGKGNFIW QSFDSPTDTI LVGQSLRAGG  180
ANKLVSRASE VNNVVGAYSL VMEPKGLSMY YKSPNSPRPI LYWTSSEWFT INKGTLTNLT  240
LTSVSDTDEG FLYYLTFIYF VTNSSSDSNR NMAYSRYNNT LSYLRLGIDG NLRFYTYNPN  300
VQGVAWELVY TFLDRDSMEK ECQLPERCGK FGLCEDSQCV ACPTPNGLTG WSKDCDVKKV  360
TSCKATDFKY YKLEGVDHFM IKYTRGDGAT KQSDCESKCT RDCKYNEYEP VPHSVGIVSE  420
VEGCKIWVPD IPVGQKPAYG MMYHSLEQAY QYYKDYAKRA GFEVRLGQQY ISKKNKENIL  480
DLKYFVCSKE GTNPAPKAGA LKKKSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18960.1	2e-07	FAR1 family protein