PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc034069.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 239aa    MW: 26889.6 Da    PI: 8.9687
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc034069.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.21.9e-10187223445
                            HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHH CS
                    HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLe 45 
                            +h ++Er+RR+++N++f  Lr ++P+ +      K++Ka+iLe
  Cse_sc034069.1_g010.1 187 NHVAVERQRRENLNQRFYALRAVVPNiS------KMDKASILE 223
                            799***********************66......********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MVENTLTYSL QWILWVIHKD TLSELSRFRR SDCGGVLEIN SRPKPAFDAK SCEEHYHSRS  60
YLAKLAWVQT FVLVPVKGGV LEIGSSSSIH DPTILFQGPN LYIFGYHPPK VLPNIFGQEL  120
SLGAKSTPKS GPVSIGFSPK VEDDMEFGSE SYEVQPSFGR NYSNGYQSME PRKRGRKPAN  180
GREEPLNHVA VERQRRENLN QRFYALRAVV PNISKMDKAS ILEVTGAPVV DFMARKDDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16430.12e-52bHLH family protein