PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc034208.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 274aa    MW: 29522.5 Da    PI: 6.7014
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc034208.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.46.7e-183176147
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           rg+W++eEd +l d+v+++G+++W +Iar ++ gR++k+c++rw + 
  Cse_sc034208.1_g010.1 31 RGPWSQEEDVILGDLVTKFGPRNWGLIARGIP-GRSGKSCRLRWCNQ 76
                           89******************************.***********985 PP
2Myb_DNA-binding26.21.9e-0883113132
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg 32 
                            r+++T  Ed ++v+a++++G++ W+ Ia+ + 
  Cse_sc034208.1_g010.1  83 RKPFTDAEDRIIVEAHAKYGNK-WAIIAKLLR 113
                            789*******************.******986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MVEEMNTNTI PVPDSSPESD VAAGEKKSKV RGPWSQEEDV ILGDLVTKFG PRNWGLIARG  60
IPGRSGKSCR LRWCNQLDPA LERKPFTDAE DRIIVEAHAK YGNKWAIIAK LLRELQDVTG  120
MEVSNYHISV DPSLTHQTLF RPTPHVGAFS VCAPPNGIQI GESRAVHSTP GPLIKACKPE  180
SIGCKFLKGF SAECVIPSRC GHGCCSGSGH GSKSQTSLLG PDFVDYEELA PFSNQELATI  240
AADLNSIAWI KSGLEKPGAT QPQSHISLPV EGLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55730.11e-44MYB family protein