PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc034293.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRF
Protein Properties Length: 146aa    MW: 16370.7 Da    PI: 8.3226
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc034293.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC73.32.8e-23101140140
                    WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsr 40 
                            +aepgrC+RtDGKkWRCs++v++g+k+CErHlhrgrsr+ 
  Cse_sc034293.1_g020.1 101 EAEPGRCKRTDGKKWRCSKEVVSGHKYCERHLHRGRSRKD 140
                            58*********************************99874 PP
2QLQ50.94.8e-184377337
                    QLQ  3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
                           FT +Ql++Lk Q+l+y y+ a++PvP++L+++i++
  Cse_sc034293.1_g020.1 43 FTFMQLEELKLQALIYNYIEAGLPVPSHLILPIWN 77
                           9*********************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MKLVAALTMN GVEGSFSLAD SSSIFDQNAN YMNIMSMNGG TGFTFMQLEE LKLQALIYNY  60
IEAGLPVPSH LILPIWNSVL ASFTGSGCDH SLYDNYKNTM EAEPGRCKRT DGKKWRCSKE  120
VVSGHKYCER HLHRGRSRKD VEAKIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52910.11e-33GRF family protein