PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc034317.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

SBP

Protein Properties

Length: 217aa MW: 24837.7 Da PI: 7.0048

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc034317.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	117.6	6.2e-37	19	94	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 C v+gC dl +++ yhrrhkvCe+hsk+p vl+sg+ rfCqqCsrf +l+efDeekrsCr+rL++hn+rrrk+q Cse_sc034317.1_g010.1 19 CLVDGCMDDLRNCRMYHRRHKVCEAHSKSPYVLISGQALRFCQQCSRFQSLEEFDEEKRSCRKRLDGHNRRRRKTQ 94 **************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MASSKRACTN TDAIQVVNCL VDGCMDDLRN CRMYHRRHKV CEAHSKSPYV LISGQALRFC 60 QQCSRFQSLE EFDEEKRSCR KRLDGHNRRR RKTQACLFSP HSGTNMLQSD CQPVHPAMAF 120 MNPHFNHPVD YTDYVYSVVC TVIVFRVIRY SLSDVEHPLS GTFSTTSNYS DPGLCYASLE 180 NDFDAGWDGV TDMGPYDFDA GWDVQSSNVN HQGYFRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	1e-39	SBP family protein