PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc034324.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 201aa    MW: 23061.9 Da    PI: 10.6044
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc034324.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.81.4e-142168148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT eEdell  ++++ G g+W + +++ g+  ++k+c++rw +yl
  Cse_sc034324.1_g010.1 21 KGPWTREEDELLSSYIARKGEGQWQALPKKAGLLHCGKSCRLRWMNYL 68
                           79******************************99************97 PP
2Myb_DNA-binding39.51.3e-1274119148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            rg  +++E++l+++++ +lG++ W++Ia + + gRt +++k++w+++l
  Cse_sc034324.1_g010.1  74 RGHISADEEDLIIRLHCLLGNR-WSLIAGRTP-GRTYNEIKNYWNTHL 119
                            667799****************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MARGHLCVLE MMNVLPTSVK KGPWTREEDE LLSSYIARKG EGQWQALPKK AGLLHCGKSC  60
RLRWMNYLRP SVKRGHISAD EEDLIIRLHC LLGNRWSLIA GRTPGRTYNE IKNYWNTHLS  120
KKLTSQGIDS KTHKPLSSPP SLNPNHNLNH SFLHWIKPKQ FQQIPMKTSQ TSTPATRTVV  180
LDLMIFLVTR LMMVSLCSWA H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.12e-62MYB family protein