PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc034357.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family M-type_MADS
Protein Properties Length: 190aa    MW: 21791.9 Da    PI: 8.2932
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc034357.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF64.79.5e-213785149
                           S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
                 SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                           k+ie +  rqvtfskRr g++KKA+EL++L++a++a+ + s+ +++y +
  Cse_sc034357.1_g030.1 37 KKIEKSNTRQVTFSKRRSGLFKKASELCILTGAQIAIFVKSPADRMYVF 85
                           689*******************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MDSSSIDSNL TTMASTSIDT NPTIKKKSTG RKKIEIKKIE KSNTRQVTFS KRRSGLFKKA  60
SELCILTGAQ IAIFVKSPAD RMYVFGHPDA NVLIEKYLQE KNNDNVSLPM LLKNDFNQRY  120
EEFLREFEAE NKRNEMIVSR GSNDHGLCYD EPIDAMGLGE LENYLCKLQK DKYDVEYRAN  180
ELMIKNLCQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.12e-24M-type_MADS family protein