PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc034522.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 172aa    MW: 20683.7 Da    PI: 9.589
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc034522.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR148.14e-153702890
                   FAR1 28 itkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.....dgkwevtkleleHnHela 90
                            +kr+f C +eg ++ +  + +k++r+r ++r+gCka++++k+++      ++w+v +++ eHnH l 
  Cse_sc034522.1_g030.1  3 KKKRDFFCHREGAPKVKVIDYSKKQRNRGSSRCGCKAHMRIKLKRineifPEEWQVVQFVAEHNHVLL 70
                           5789**************999*********************99885555689************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MEKKKRDFFC HREGAPKVKV IDYSKKQRNR GSSRCGCKAH MRIKLKRINE IFPEEWQVVQ  60
FVAEHNHVLL STQEVRFLPS YRCITKEDEN RILMLKEGGL SVRQLMRVME LERNVRHEEL  120
SFLVKDVHNF LNKYHRMNSN NDAKDLLEYC KQTKNENPNF QYTYTLDEES SK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.16e-45FAR1 family protein