PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc034802.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 201aa MW: 22983.8 Da PI: 4.755

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc034802.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	20.4	9.5e-07	50	74	7	30
HHHHHHHHHHHHHHHHHHCTSCC.C CS HLH 7 erErrRRdriNsafeeLrellPk.a 30 Er+RR+++N++++ Lr ++P+ + Cse_sc034802.1_g010.1 50 VSERNRRKKLNDRLFALRAVVPNiS 74 57********************955 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MENITDVNWE SILQTEDYSW GVLEETFSGC SDSTSQDGGQ SSSPASKNIV SERNRRKKLN 60 DRLFALRAVV PNISKMDAID YIQTLHEQER TILAELTELE SQKSEPENFD FNQETKFMSM 120 EKSKKIRVEQ AFDSSGSSSY PIEVQDTVLV SLKCNKRRDT IVKLCEVFES LKLKIVTANI 180 SSFSERLFNT LFIQLYITHA T

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	152	158	LKCNKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57150.3	2e-46	bHLH family protein