PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc034955.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 358aa    MW: 39633.2 Da    PI: 10.8314
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc034955.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK25.91.9e-081631921746
                 RWP-RK  17 pikdAAkeLgvclTvLKriCRqyGIkRWPh 46 
                            + ++AA  Lgv+ + LKriC  +GIk WP+
  Cse_sc034955.1_g010.1 163 SFEEAADILGVSRSKLKRICTSLGIKGWPY 192
                            6799*************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MSNGVIHSKA SKKSLALTKH PPYFEMVSDA IVTLKERNGS SQYAIGKFIQ DKHKEHLPVN  60
FKKMLLIQLK KLVASHKLVK VKASYKLPSA AKPKPKPKAT AKKAPAKKKP AAKTKRTAKA  120
KLAPKAKPAA KTVSKKAPAK KKPAKAKPGS VKAAAKSNLN PKSFEEAADI LGVSRSKLKR  180
ICTSLGIKGW PYAPNKSDSH SSNFRGSNEH NPATHTEHAM YSSTHVETIL IDGLGQPKTT  240
LKNSVKPLTI KATYKEDIVR FPFILSDGLT NLKEQIATRF PLKLESFRLK YEDKDGDMIL  300
IACDSDLDLS ANDFRRPDGH TVIRLVANNY EILLAREVKQ HTWTFPWAPF WSSTIGWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.17e-12Nin-like family protein