PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc035016.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Dof

Protein Properties

Length: 340aa MW: 36128.9 Da PI: 9.8847

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc035016.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.3	8.1e-39	82	141	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e l+cprCdstntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+ss Cse_sc035016.1_g010.1 82 EPGLNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSS 141 56789****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MVFSSVPQYL DHHNWHHQLQ QSNHHGSGGV GGGVGVGENP NLPPSTTPPQ PGGGGGGVGG 60 EGSIRPGSMV DRARLAKLPL PEPGLNCPRC DSTNTKFCYF NNYSLTQPRH FCKTCRRYWT 120 RGGALRNVPV GGGCRRNKRS SKGRSSKSPS QPGPNKSLSV SPPRSNSDNM TSTQIPHPSS 180 LQLPFMSSLS QYGGVGGNLS SSIAGFQPQS EIGSFQIGSG SSNGNNFNNI LSIGGGENWR 240 LPFLPGFEVP NNTNNLFNYQ SQGVTEAQAS SMVGGDMRSK NSGIDNPQID PPVKAEDNRG 300 LNLSRQFLGM LGNTNQQAWA GNSWAEFPSV STATPTTNFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.2	5e-39	Dof family protein