PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc035172.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family TCP
Protein Properties Length: 285aa    MW: 31086.4 Da    PI: 8.2634
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc035172.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP130.12.2e-4054178289
                    TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg 88 
                            ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+p+++++tgt++++a+++  + s +ss s+ s +
  Cse_sc035172.1_g010.1  54 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPSVIAATGTGTIPANFTsLNISLRSSRSSISTP 141
                            789******************************************************************9998444444444422222 PP

                    TCP  89 ....................................k 89 
                                                                +
  Cse_sc035172.1_g010.1 142 shlrssyfnpnftlpqrrnyssfgidnpssnllnfgS 178
                            3344445555555555555555555555555555541 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
PNFPFQLLEK KDDEACTSSA ATTTTIYPSL TIATDTTTAA AVAGSSTDLS NKQPPKRTST  60
KDRHTKVDGR GRRIRMPALC AARVFQLTRE LGHKTDGETI EWLLQQAEPS VIAATGTGTI  120
PANFTSLNIS LRSSRSSIST PSHLRSSYFN PNFTLPQRRN YSSFGIDNPS SNLLNFGSST  180
FLNQMIQAKQ ETPENSVETP ENSVGSGGED FARTEKKHRH PTEQDFSPLQ MQMGNYLLQS  240
STGAMAANHG SIPANFLMVA SNSNQHQHQP MNGDPVWTIP NVNNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.13e-45TCP family protein