PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc035178.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 229aa    MW: 26316.4 Da    PI: 9.7904
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc035178.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.16.9e-1848138199
                            EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
                     B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                            f k ++ps+vl s +l+lpkkf+  h   +e ++t+tl desg +++ ++     s r+ l++GW++F  +++L++gD++ F+l+g+ 
  Cse_sc035178.1_g010.1  48 FAKCMLPSNVLYSFWLILPKKFCVLHF--PEHDTTITLVDESGVEFKTNY----LSARHGLSGGWRGFSFSQKLQQGDILFFRLVGSC 129
                            889********************9997..456789***************....444566************************9954 PP

                            EE..EEEEE-S CS
                     B3  89 efelvvkvfrk 99 
                            +  l v+++r+
  Cse_sc035178.1_g010.1 130 R--LQVHIVRR 138
                            4..58888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MSEKPHKSSS KGKRTRVCDI YNNAEDQYMC LERAGILLER LDTGPPKFAK CMLPSNVLYS  60
FWLILPKKFC VLHFPEHDTT ITLVDESGVE FKTNYLSARH GLSGGWRGFS FSQKLQQGDI  120
LFFRLVGSCR LQVHIVRRYG LEAVEAAFSL LEMHPRVKRT KTLTSGKVKY EKVNKGKRMK  180
RRPRKLFVIP PNNHPTPVDI EEDAQWTSYT SLYDQCANSN DMLNLVEGI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177185KRMKRRPRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.12e-29B3 family protein