PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc035188.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 173aa MW: 19419.1 Da PI: 10.0039

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc035188.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.8	4e-05	83	105	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg+ F++ +L H+r+H Cse_sc035188.1_g010.1 83 HRCKLCGMGFPTGQSLGGHMRKH 105 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence
MMMGGNRYPN DDVEEFARVN ASNITQRVEG DPDAAQRYKS IYKCKEKGCD KEYDSFQALG 60 GHRASHKNFR IQTGSTKSVP KLHRCKLCGM GFPTGQSLGG HMRKHRLGKL EVNKAMVLHH 120 RQAKLEDNKA MVLRRPVDST SSSSSGVSNL SSKKAFEFDL NMMPQEKEEV NVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46070.1	1e-19	C2H2 family protein