PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc035290.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 160aa    MW: 18240 Da    PI: 9.8983
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc035290.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.3e-081358553
                           HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
                    HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53
                            +++E++RRd++++ +++L +ll  +   + +++     LekA++ Ik+
  Cse_sc035290.1_g010.1 13 QSAMEKQRRDQMKNLYSKLASLLCLQ---SYERMPLLGLLEKATDSIKQ 58
                           589**********************9...99****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MKRPSGSSSH RQQSAMEKQR RDQMKNLYSK LASLLCLQSY ERMPLLGLLE KATDSIKQWK  60
EMVEQLTARK KEIENELRGV MSNEINLHVV QVSEMDSNLE VNLIIKASNK RIELLRVLSI  120
IEQGGAEIIN YSLSNGTKHT LHHSCSGTPN PKNVSYFTKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10585.16e-13bHLH family protein