PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc035291.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MIKC_MADS
Protein Properties Length: 240aa    MW: 26931.6 Da    PI: 8.0442
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc035291.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF74.77.2e-241056248
                           ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
                 SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
                            i++ks rqvtfskRr+g++KKA  LSvLCd+++av++fs +gkly 
  Cse_sc035291.1_g020.1 10 LIQDKSSRQVTFSKRRTGLMKKARQLSVLCDVDIAVLVFSAQGKLYQ 56
                           699******************************************96 PP
2K-box211.4e-081061592982
                  K-box  29 enLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqk 82 
                            e Lq+  R +  ++ e+Ls+ ++ +Le +L+ +l + R +K++l++e +++lq 
  Cse_sc035291.1_g020.1 106 ELLQTVDRLVEENNSEELSVTDMTELELELNAALVQTRLRKTQLMTEYMSTLQA 159
                            55565555555566689*********************************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MGRRKLEMKL IQDKSSRQVT FSKRRTGLMK KARQLSVLCD VDIAVLVFSA QGKLYQSCNG  60
TSANSVEHIL SRYERSCTEA GERTNNGAGG QLEVLSQCTK FRTCRELLQT VDRLVEENNS  120
EELSVTDMTE LELELNAALV QTRLRKTQLM TEYMSTLQAE VCLYLISLHK KLSRVDQNHG  180
DTKSVDEMRY NETLVKYKTE LDVASAKQLQ KDGGCGGLND LASNQTNSAQ HLVTLPLFNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65050.11e-34MIKC_MADS family protein